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# Choose your path

Two ways to find what you need: by the task you have in mind, or by the kind of data you want.

## By what you want to do

Look up a gene or SNP

Genotypes, haplotypes, allele frequencies for a region.

SNP-Seek →
Get variant effects

Gene models + predicted consequences via Ensembl REST.

GrameneOryza →
Query at scale, efficiently

Stream one locus across all 19,035 genomes — no full download.

Remote tabix →
Climate ↔ genome (G×E)

Which environment tracks variation at my gene?

Oryza CLIMtools →
Predict a trait

Score genotypes with a pre-trained model; benchmark it.

Workflow C →
Download raw data

Reads, full variant archives, citable DOIs.

Archives →

## By data type

I have / want… | Go to | How
--- | --- | ---
A gene or region of interest | GrameneOryza / SNP-Seek | Ensembl REST · genotype viewer
Genotypes for all accessions at a locus | Remote tabix / SNP-Seek | stream the region · or precomputed table
An environmental / climate question | Oryza CLIMtools | GenoCLIM / CLIMGeno tables
A phenotype to predict | Code & Models | pre-trained models (Docker/Colab)
Bulk variants or raw reads | Archives | NCBI · EVA · KAUST DOI
A summary, not a query | Precomputed tables | Zenodo deposit (allele freq, benchmark, …)

New to the resource? The example workflows walk from a gene of interest all the way to a testable hypothesis, touching every platform.