Start here

Choose your path

Two ways to find what you need: by the task you have in mind, or by the kind of data you want.

By what you want to do

Genotypes, haplotypes, allele frequencies for a region.

Gene models + predicted consequences via Ensembl REST.

Stream one locus across all 19,035 genomes — no full download.

Which environment tracks variation at my gene?

Score genotypes with a pre-trained model; benchmark it.

Reads, full variant archives, citable DOIs.

I have / want…	Go to	How
A gene or region of interest	GrameneOryza / SNP-Seek	Ensembl REST · genotype viewer
Genotypes for all accessions at a locus	Remote tabix / SNP-Seek	stream the region · or precomputed table
An environmental / climate question	Oryza CLIMtools	GenoCLIM / CLIMGeno tables
A phenotype to predict	Code & Models	pre-trained models (Docker/Colab)
Bulk variants or raw reads	Archives	NCBI · EVA · KAUST DOI
A summary, not a query	Precomputed tables	Zenodo deposit (allele freq, benchmark, …)

New to the resource? The example workflows walk from a gene of interest all the way to a testable hypothesis, touching every platform.